Fslstats

#!/bin/sh

# Peaks: -x : output coordinates of the maximum intensity voxel 

fslstats img -x

Fslstats

#!/bin/sh

# Get the voxel count for a mask
fslstats mask -V | awk '{printf $1 "\n"}'

# Get the volume in cubic mm for a mask
fslstats mask -V | awk '{printf $2 "\n"}'

Fslstats

#!/bin/sh

# Center of gravity: 
# -C : output centre-of-gravity (cog) in voxel coordinates 
# -c : output centre-of-gravity (cog) in mm coordinates 

fslstats mask -C -c

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