/Shell/Bash/Bcftools extract information

Bcftools extract information

# Example usage:
bcftools query --format '%CHROM\t%POS\t%INFO/END\t[%GT]\n' input_file.vcf
# Where:
#	- Fixed columns like CHROM and POS are referred to as %COLUMN
#	- Info fields need to be specified as %INFO/TAG
#	- Format fields need to be enclosed in brackets
#	- The tab \t and new line \n characters are used to format the output

Source: samtools.github.io

Similar codes

1 vote119 views2 answers
How to copy git repository to another repository
Shell/Bash
19 votes127 views2 answers
Flutter Android sdk manager not found
Shell/Bash
1 vote108 views1 answer
Install ext-dom
Shell/Bash
0 vote118 views1 answer
Ubuntu delete contents of folder
Shell/Bash
0 vote111 views1 answer
How to kill local server in ubuntu by command
Shell/Bash
0 vote125 views1 answer
How to link certbot to bin dir in ubuntu
Shell/Bash
13 votes116 views1 answer
Sharp npm
Shell/Bash
5 votes135 views1 answer
Linux curl get request
Shell/Bash
0 vote111 views1 answer
Coder.com docker install
Shell/Bash
34 votes128 views1 answer
Roll back last commit in git
Shell/Bash